_Assay.normalize_barcodes#
missionbio.mosaic.assay._Assay.normalize_barcodes
- _Assay.normalize_barcodes(allow_duplicates: bool = False) None #
Remove all but [^ACGT] from barcodes
This is needed since some pipelines add tube suffix to the barcodes
- Parameters:
allow_duplicates – if True, do not check for duplicate barcodes
- Raises:
UserError – when missing barcode dataset or there are duplicate barcodes
< Class _Assay