io

Contents

io#

missionbio.mosaic.io

Module to read and write h5 files

Functions#

get_variants(filepath[, filter_variants, ...])

Get the appropriate DNA variants.

load(filepath[, filter_cells, ...])

Loading the .h5 file with one or more assays.

load_example_dataset(path[, single])

Load a sample dataset

save(sample, path[, raw, mode])

Save the analyzed sample as .h5.

to_zip(sample, path)

Export the sample to a zip file.