LikelihoodMethod

missionbio.demultiplex.protein.pace.likelihood.LikelihoodMethod

class LikelihoodMethod(protein: Assay, truth: Truth, min_distance_for_doublet: int = 3, **kwargs: Any)

A PACE method to categorize the cells into the most likely category based on the given truth.

Functions

label_cells()

Adds the LABEL row attribute based on the maximum likelihood method of assignment

param protein:

The protein assay

param truth:

A Truth object

param min_distance_for_doublet:

The minimum number of antibodies that must be different between two clones for their doublet to be considered.

param kwargs:

The other parameters passed to PACEModel.