Rna

missionbio.mosaic.rna.Rna

class Rna(*args, **kwargs)

Container for RNA data.

Inherits most methods from _Assay. See that for the documentation on other methods and visualizations

Algorithms

normalize_reads([correct_background, ...])	Normalize raw RNA counts
get_markers([layer, split_by, method, ...])	Get the markers for each RNA cluster using DE analysis
label_pbmc(**kwargs)	Label PBMC cell types based on RNA expression patterns.

RNA specific visualizations

mean_reads_barplot([layer, width_scalar])	Creates a barplot showing the mean expression per gene
update_coloraxis(fig, layer[, coloraxis])	Sets the colorscale for DNA.

Parameters:

argslist

To be passed to the _Assay class.

kwargsdict

To be passed to the _Assay class.