COMPASS.parse_var_id

missionbio.mosaic.algorithms.compass.COMPASS.parse_var_id

static COMPASS.parse_var_id(variant_id: str) → Series

Parameters:

variant_idstr

The variant in “chr:pos:ref/alt” format

Returns:

pd.Series:

The index is [“CHR”, “POS”, “REF”, “ALT”] and the values are extracted from the variant name

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< Class COMPASS