Heatmap.__init__

missionbio.plotting.heatmap.Heatmap.__init__

Heatmap.__init__(data: DataFrame, y_groups: Sequence, x_groups: Optional[Sequence] = None, palette: Optional[Dict] = None, ytick_proportions: bool = False, title: str = '') → None

Parameters:

datapd.DataFrame

The dataframe whose values are to be plotted. The index name is used for the title of the colorbar, the column names are shown on hovering over the heatmap.

y_groupsnp.ndarray

The labels for each row.

x_groupsnp.ndarray

The label for each column. These must be contiguous. For example, [“1”, “2”, “2”] is permitted, but [“1”, “2”, “1”] is not.

paletteOptional[Dict]

The dictionary with the color for each unique value in y_groups.

ytick_proportionsbool

Whether to show the fraction of rows of each y_group on the y-axis ticks.

titlestr

The title of the plot

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< Class Heatmap