CopyNumber.callback_create_figure

CopyNumber.callback_create_figure#

missionbio.mosaic.workflows.copy_number.CopyNumber.callback_create_figure

CopyNumber.callback_create_figure(plot_type: str, clone: str, features: Sequence = (), _: Optional[Any] = None) → Figure#
Parameters:
plot_typestr
The type of the plot to create. One of:

  1. Heatmap positions

  2. Heatmap genes

  3. Line-plot positions

  4. Line-plot genes+amplicons

clonestr

The name of the clone to plot

featuresSequence

The list of features to plot in the figure. It can be a list of chromosomes or genes.

_Any

A parameter input simply to ensure the callback is called when the normalization and filtering function is performed.

< Class CopyNumber

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