Protein.read_depth_dependence

missionbio.mosaic.protein.Protein.read_depth_dependence

Protein.read_depth_dependence(ab: str, colorby: Union[str, ndarray, DataFrame] = 'density') → FigureWidget

Scatter plot of the read depth dependence of an antibody.

Parameters:

abstr

The antibody to plot.

colorbystr / np.ndarray

The attribute to color the plot by. This is passed to missionbio.mosaic.assay._Assay.scatterplot(). See its documentation for all the available options.

Returns:

figplotly.graph_objects.FigureWidget

This figure can be used to label barcodes, just like any other scatterplot.

See also

missionbio.mosaic.assay._Assay.scatterplot()

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< Class Protein