_Assay.set_labels

_Assay.set_labels#

missionbio.mosaic.assay._Assay.set_labels

_Assay.set_labels(clusters: Union[Sequence, dict, _Assay], default_label=None)#

Set the labels for the barcodes.

Modifies the id row attribute of the assay.

Parameters:
clusterslist, dictionary, or Assay

The clusters corresponding to the barcodes.

  • List: The labels are set in the same order as the order of barcodes.

  • Dict: The dictionary should be a mapping of cluster names to the barcodes in that cluster.

  • Assay: The labels from the assay are used. The palette of the assay is also copied.

default_labelstr

In case not all barcodes are labeled, then this is the label of the remaining barcodes. If None, then the labels for missing barcodes are not updated.

< Class _Assay

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