COMPASS.prep_amplicon_reads

COMPASS.prep_amplicon_reads#

missionbio.mosaic.algorithms.compass.COMPASS.prep_amplicon_reads

COMPASS.prep_amplicon_reads(reads_file_name: Union[str, Path])#

Prepare input for phylogeny per-amplicon-read data

Parameters:
reads_file_namestr

The name of the file in which the read counts per region are stored

< Class COMPASS

Contents