COMPASS.node_descriptions

missionbio.mosaic.algorithms.compass.COMPASS.node_descriptions

COMPASS.node_descriptions(percent: bool = False) → Dict[str, str]

Generate the description for each node

It uses the following format:

1. SNV: The somatic variants present in the node

2. CNLOH: The CNLOH regions present in the node

3. CNV: The CNV regions present in the node

4. The proportion of cells in the node if percent is True

Parameters:

percentbool

Whether to return the proportion of cells in the description

Returns:

Dict[str, str]:

The description for each node

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< Class COMPASS