COMPASS.human_readable_variant_name

missionbio.mosaic.algorithms.compass.COMPASS.human_readable_variant_name

static COMPASS.human_readable_variant_name(variant_id: str, annotations: Dict[str, Dict[str, str]]) → str

Create a human-readable name for the variant.

Parameters:

variant_idstr

The variant in “chr:pos:ref/alt” format

annotationsDict[str, Dict[str, str]]

DataFrame from Dna.get_annotations() converted to a dictionary. with the variant id as the key

Returns:

str:

human-readable variant name.

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< Class COMPASS