Truth.truncate

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Truth.truncate#

missionbio.demultiplex.dna.truth.Truth.truncate

Truth.truncate(before=None, after=None, axis=None, copy: bool = True) → NDFrameT#

Truncate a Series or DataFrame before and after some index value.

This is a useful shorthand for boolean indexing based on index values above or below certain thresholds.

Parameters:
beforedate, str, int

Truncate all rows before this index value.

afterdate, str, int

Truncate all rows after this index value.

axis{0 or ‘index’, 1 or ‘columns’}, optional

Axis to truncate. Truncates the index (rows) by default. For Series this parameter is unused and defaults to 0.

copybool, default is True,

Return a copy of the truncated section.

Returns:
type of caller

The truncated Series or DataFrame.

See also

DataFrame.loc

Select a subset of a DataFrame by label.

DataFrame.iloc

Select a subset of a DataFrame by position.

Notes

If the index being truncated contains only datetime values, before and after may be specified as strings instead of Timestamps.

Examples

>>> df = pd.DataFrame({'A': ['a', 'b', 'c', 'd', 'e'],
...                    'B': ['f', 'g', 'h', 'i', 'j'],
...                    'C': ['k', 'l', 'm', 'n', 'o']},
...                   index=[1, 2, 3, 4, 5])
>>> df
   A  B  C
1  a  f  k
2  b  g  l
3  c  h  m
4  d  i  n
5  e  j  o

>>> df.truncate(before=2, after=4)
   A  B  C
2  b  g  l
3  c  h  m
4  d  i  n

The columns of a DataFrame can be truncated.

>>> df.truncate(before="A", after="B", axis="columns")
   A  B
1  a  f
2  b  g
3  c  h
4  d  i
5  e  j

For Series, only rows can be truncated.

>>> df['A'].truncate(before=2, after=4)
2    b
3    c
4    d
Name: A, dtype: object

The index values in truncate can be datetimes or string dates.

>>> dates = pd.date_range('2016-01-01', '2016-02-01', freq='s')
>>> df = pd.DataFrame(index=dates, data={'A': 1})
>>> df.tail()
                     A
2016-01-31 23:59:56  1
2016-01-31 23:59:57  1
2016-01-31 23:59:58  1
2016-01-31 23:59:59  1
2016-02-01 00:00:00  1

>>> df.truncate(before=pd.Timestamp('2016-01-05'),
...             after=pd.Timestamp('2016-01-10')).tail()
                     A
2016-01-09 23:59:56  1
2016-01-09 23:59:57  1
2016-01-09 23:59:58  1
2016-01-09 23:59:59  1
2016-01-10 00:00:00  1

Because the index is a DatetimeIndex containing only dates, we can specify before and after as strings. They will be coerced to Timestamps before truncation.

>>> df.truncate('2016-01-05', '2016-01-10').tail()
                     A
2016-01-09 23:59:56  1
2016-01-09 23:59:57  1
2016-01-09 23:59:58  1
2016-01-09 23:59:59  1
2016-01-10 00:00:00  1

Note that truncate assumes a 0 value for any unspecified time component (midnight). This differs from partial string slicing, which returns any partially matching dates.

>>> df.loc['2016-01-05':'2016-01-10', :].tail()
                     A
2016-01-10 23:59:55  1
2016-01-10 23:59:56  1
2016-01-10 23:59:57  1
2016-01-10 23:59:58  1
2016-01-10 23:59:59  1

< Class Truth

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