Sample.assay_scatter
Sample.assay_scatter#
- Sample.assay_scatter(ax=None, title='', highlight=None)#
Plots DNA reads vs Protein reads.
This plot is made for all barcodes, not just called cells, and the called cells are colored.
- Parameters
- axmatplotlib.pyplot.axis
The axis to plot the plot on.
- titlestr
The title of the plot.
- highlightlist
The barcodes to highlight on the plot (besides the called cells).
- Returns
- axmatplotlib.pyplot.axis
- Raises
- ValueError
When the raw counts are not loaded.