Cnv.test_signature

Cnv.test_signature(attribute, kind='ttest')

Run a statistical test on the clusters

Parameters

attributestr

Name of the layer or row attribute to be evaluated. Uses _Assay.get_attribute() constrained by row to retrieve the values.

kind[“ttest”]

The test to perform

Returns

pvalpd.DataFrame

The feature p-value of for each cluster vs other clusters.

statpd.DataFrame

The value of the test-statistic corresponding to the pval.

Notes

Currently only supports t-test. kind parameter has been added for future releases.