missionbio.mosaic.io.save

missionbio.mosaic.io.save(sample: Union[missionbio.mosaic.sample.Sample, missionbio.mosaic.samplegroup.SampleGroup], path: Any, raw: bool = False, mode: str = 'w-') → None

Save the analyzed sample as .h5.

Parameters

sample:

The sample to be saved.

path:

The path to save it to.

raw:

Whether to save the raw counts of the assays or not.

mode:

mode to open the h5 file with

r+ Read/write, file must exist w- Create file, raise error if file exists (default) w Create file, truncate if exists a Read/write if exists, create otherwise