Protein¶

class missionbio.mosaic.protein.Protein(*args, **kwargs)¶

Container for Protein data

Inherits most methods from missionbio.mosaic.assay._Assay. See that for the documentation on other methods and visualizations.

Algorithms

`get_signal_profile`(ab[, attribute, …])	Identify the peaks and valleys in the antibody signal
`get_scaling_factor`()	Identifies the appropriate scaling factor for oversequenced runs.
`normalize_reads`([method, jitter, scale, …])	Normalize read counts.

Protein-specific visualizations

`reads_to_ab`(**kwargs)	Violin plot for reads taken by each antibody.
`cells_per_ab`([title])	Bar plot of non-zero read cells to antibodies.

Extended methods

Mosaic