Protein.get_signal_profile¶

Protein.get_signal_profile(ab, attribute=None, features=None, bw=0.02, show_plot=False)¶

Identify the peaks and valleys in the antibody signal

Parameters

abstr: The id of the antibdoy for which the profile is to be ascertained.
attributestr / np.array: The layer to use to get the signal profile. Uses _Assay.get_attribute() to retrieve the values constrained by row+col. If None, then the signal profile is calculated using the asinh normalizatioin.
featureslist-like: Passed to _Assay.get_attribute() if the attribute is not None
bwfloat: The bandwidth used for fitting the kernel density on the signal profile.
show_plotbool: Whether to show diagnostic plots or not.

Returns

Mosaic