Sample.read_data

Sample.read_data()

Plot read statistics of each barcode.

A total of 6 plots are generated:
  1. Protein reads vs DNA reads, colored by clone.

  2. Genotyped knee plot, showing clonal distribution along the rank-ordered knee.

  3. Distribution of each clone type by rank-ordered barcode, useful to identify doublets/mergers.

  4. 1X/10X plot colored by clone, useful for identifying partial/mixed barcodes.

  5. DNA reads vs unique DNA targets.

  6. Protein reads vs unique protein targets.