Protein#
missionbio.mosaic.protein.Protein
- class Protein(*args, **kwargs)#
Container for Protein data
Inherits most methods from
_Assay. See that for the documentation on other methods and visualizations.Algorithms#
normalize_reads([method, jitter, scale, ...])Normalize read counts.
Protein-specific visualizations#
reads_to_ab(**kwargs)Violin plot for reads taken by each antibody.
cells_per_ab([title])Bar plot of non-zero read cells to antibodies.
update_coloraxis(fig, layer[, coloraxis])Sets the colorscale for Protein.
Extended methods#
run_umap(attribute[, output_label])Extends
run_umap()